All-ORders Spectral Algorithm (AORSA)
The PERC project is a DOE/MICS
sponsored SciDAC
project to develop a science for understanding performance of scientific
applications on high-end computer systems and to develop engineering strategies
for improving performance on these systems. The project draws on DOE's
key computation science applications in climate modeling, astrophysics,
high energy physics, genomics, astrophysics, and fusion energy and will
seek to:
-
understand the key factors in applications that affect performance
-
understand the key factors in computer systems that affect performance
-
develop models that accurately predict performance of applications on systems
-
develop an enabling infrastructure of tools for performance monitoring,
modeling, and optimization
-
validate these ideas and infrastructures via close collaboration with DOE
SC and other applications owners
-
transfer the technology to end users
The all-orders spectral algorithm (AORSA)
AORSA is one of the major applications of DOE's fusion
modeling program and so has been selected by the PERC project as one
of the applications to analyze and model. The AORSA model is being used
in the Fusion Energy
SciDAC project :
Numerical Computation of Wave Plasma-Interactions in Multi-dimensional
Systems . There are a 2-D and 3-D versions of AORSA. AORSA-2D provides
a high-resolution, two-dimensional solutions for mode conversion and high
harmonic fast wave heating in tokamak plasmas. AORSA-2D takes advantage
of new computational techniques for massively parallel computers to solve
the integral form of the wave equation in two dimensions without any restriction
on wavelength relative to orbit size, and with no limit on the number of
cyclotron harmonics retained. AORSA-3D model provides fully three-dimensional
solutions of the integral wave equation for minority ion cyclotron heating
in three dimensional stellarator plasmas. By combining multiple periodic
solutions for individual helical field periods, it is possible to obtain
complete 3-D wave solutions valid over the entire volume of the stellarator
for arbitrary antenna geometry. AORSA algorithms are used in production
on the IBM SPs at both ORNL and NERSC and on the Compaq Alpha server located
at ORNL. AORSA moels are research models and as such, they are not community
supported , and their is no formal documentation describing these codes.
Algorithm Performance
Pat Worley's results
shows the performance of AORSA-3D on Cheetah which is an early evaluation
IBM-SP4 machine located in the Center
for Computational Sciences at ORNL. The main scaling parameters
are the number of Fourier modes (nmodesx, nmodesy and nmodesphi (3-D version)
) and the number of block rows and block columns that the matrix is divided
into (nprow and npcol).
All of the codes are written in FORTRAN and use MPI for message passing.
Equally important, these codes require the ScaLAPACK
, BLACS and PBLAS
libraries. Future versions will be based on FORTRAN 90.
Download, porting, and running
The AORSA programs and data files can be downloaded from XXXX. The
download includes a Notes.AORSA file that will help you install and run
the application. The Notes.AORSA file includes the following:
-
Directory structure
-
Compiling the model
-
Validated input and output files
-
Instructions on how to run the model
General Overview
The AORSA package contains both the 2D and 3D versions of the code,
the input files used for modeling specific problem sizes, and a set of
run scripts for specific problem sizes. From the top directory, a user
can build the model by type make -f make.(Arch).(2D or 3D). For example,
to build AORSA-3D on the Compaq Alpha-Server, one would type "make -f makefile.compaq.3D.
Building the model executable and running the model are two separate, distinct
steps. The model has been tested and will run on the following machines:
IBM SP, IBM p690 and Compaq Alphaserver.
Directory structure
-
./Makefiles Architecture
dependent makefiles for making AORSA
-
./src
Source Code
-
./obj
object files
-
./run
Contains subdirectories of specific runs
-
./run/xaorsa executable
Compiling the model
To build the model executable, go to the top directory and type make
-f make.(Arch).(2D or 3D). Compiling takes ~5 minutes. The executable will
be placed in the run subdirectory and and will be called xaorsa(3d or 2d).
Changing the number of processors
This requires editing the input file aorsa(3d or 2d).in
-
nprow - number of porcessors in the i-index
direction
-
npcol - number of segments in the j-index
direction
and changing the number of processors, NP, in the run script file. Note
that the total number of processors, NP, equals nprow*npcol.
Running the model
Performance Data
Last Modified Thursday, 03-Jan-2002
13:08:16 EST sheltonwajr@ornl.gov
(touches: 19 )
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Shelton's page
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