## BLPT ANALYSIS USING LAV METHOD

### See Table 1 and Table 2 in the paper

```

BLPT ANALYSIS USING LAV METHOD-- see ORNL-6818 Report  for   AC153
-------------------------------------------------------------------
Treatment Grp       Well Counts (see Table 1)          Residuals*
day5 controls   965  1173   828   862  1314.9    44.3 -31  -11  -46 -42
day5 controls  1474  7237  1021   976  1314.9    44.3  11  171  -25 -30
day5 controls  1500  1729  1672  1992  1314.9    44.3  13   27   24  42
day5 be1  1050   706  1434   687   861.0    36.3  20  -20   51 -23
day5 be10  1551  1466  1661  2301  1605.1    10.7  -3   -9    3  36
day5 be100  3571  5780  4011  5229  4579.7    31.3 -25   23  -13  13
day7 controls  9202  5253  3786  5212  3427.0    56.3  99   43   10  42
day7 controls  2310  2844  1915  3102  3427.0    56.3 -39  -19  -58 -10
day7 controls  2458  3936  3087  6588  3427.0    56.3 -33   14  -10  65
day7 be1   714  1135  6084  1097  1115.8    39.7 -45    2  170  -2
day7 be10   786   846  2757   652   815.4    22.3  -4    4  122 -22
day7 be100  6037  8349  6852 10449  7563.6    27.8 -23   10  -10  32
pha 82425 52954 52669 50487 52811.3     4.1  45    0    0  -5
candida 35501 21623 21551 22087 21853.8     2.1  49   -1   -1   1

-------------------------------------------------------------------
FIT =  Fitted Value = exp(median) for each treatment group
* Residuals and Smad are on Log Percent units (L%)

Stimulation Indices
Day 5		   Day 7	Positve Controls
be1  be10 be100    be1   be10 be100     pha candida
log(SI) -0.423 0.199 1.248 -1.122 -1.436 0.792   4.792   3.909
SI  0.655 1.221 3.483  0.326  0.238 2.207 120.490  49.860

Summary Statistics for AC153
------------------------------------------------------
Phitilde (Coef. of Variation)*
------------------------------
Overall:	 0.367
Day 5 Control:	 0.443 	Day 5 Treated:	 0.34 	Day 5 Pooled:	 0.384
Day 7 Control:	 0.563 	Day 7 Treated:	 0.276 	Day 7 Pooled:	 0.365
------------------------------
N:		 56
Nprime:		 53.06
N > z(.995):	 4
N > z(.9995):	 3
-------------------------------
* Phitilde is MAD est. of the std. dev. on log scale
(corresponds to CV on orig. scale)

Results Of Outlier Rejection Method for Data In Table 1

See Table 2 in The Paper
====================================================
METHOD 1 - OUTLIER REJECTION METHOD      AC153
====================================================
Reps Time      Avg    CV log(SI)    SI
day5 controls   10    4 1220.000 0.281      NA    NA
day5 be1    3    4  814.333 0.251  -0.404 0.667
day5 be10    4    4 1744.750 0.217   0.358 1.430
day5 be100    4    4 4647.750 0.222   1.338 3.810
day7 controls    8    4 2929.750 0.239      NA    NA
day7 be1    3    4  982.000 0.237  -1.093 0.335
day7 be10    3    4  761.333 0.130  -1.348 0.260
day7 be100    4    4 7921.750 0.245   0.995 2.704
------------------------------------------------------------------

```