%A G. A. Geist
%A C. A. Serbin
%A A. D. Solomon
%A J. Tomlinson
%T PCMSOL1 - A Computer Simulation Code for a Direct Gain Passive Solar Structure, Part I:  Theory and Basic Relations; Part II:  Users Guide
%R ORNL/CSD-127/P1,P2
%I Union Carbide Corporation
%C Oak Ridge, Tennessee
%D 1984

%A R. F. Wood
%A G. A. Geist
%A A. D. Solomon
%A D. H. Lowndes
%A G. E. Jellison
%T Modeling of Bulk Nucleation and Multiple Phase Front Formation in Pulsed Laser Melted Amorphous Silicon
%B Mat. Res. Soc. Simp. Proc.
%V 35
%P 159-168
%I North-Holland
%C New York
%D 1984

%A R. E. Funderlic
%A G. A. Geist
%T Torus Data Flow for Parallel Computation of Missized Matrix Problems
%J Linear Algebra Appl.
%V 77
%D 1986
%P 149-163
%O [Also published as technical report ORNL-6125, February 1985]

%A G. A. Geist
%T Efficient Parallel LU Factorization with Pivoting on a Hypercube Multiprocessor
%J Parallel Computing
%O accepted [Also published as technical report ORNL-6211, October 1985]

%A V. Alexiades
%A G. A. Geist
%A A. D. Solomon
%T Numerical Simulation of a HgCdTe Solidification Process
%R ORNL-6127
%I Oak Ridge National Laboratory
%C Oak Ridge, Tennessee
%D August 1985

%A G. A. Geist
%A R. F. Wood
%T Modeling of Nonequilibrium Melting and Solidification in Laser-Irradiated Materials [A Description and Users Guide to the LASER8 Computer Program]
%R ORNL-6242
%I Oak Ridge National Laboratory
%C Oak Ridge, Tennessee
%D November, 1985

%A G. A. Geist
%A M. T. Heath
%T Parallel Cholesky Factorization on a Hypercube Multiprocessor
%J Parallel Computing
%O accepted [Also published as technical report ORNL-6190, August 1985]

%A G. A. Geist
%A M. T. Heath
%T Matrix Factorization on a Hypercube Multiprocessor
%B Hypercube Multiprocessors 1986
%E M. T. Heath
%I SIAM
%C Philadelphia
%D 1986
%P 161-180

%A R. F. Wood
%A G. A. Geist
%T Modeling of Nonequilibrium Melting and Solidification in Laser-Irradiated Materials
%J Phys. Rev. B
%V 34(4)
%D August 1986
%P 2606

%A R. F. Wood
%A G. A. Geist
%T Theoretical Analysis of Explosively Propagating Molten Layers in Pulsed-Laser Irradiated a-Si*
%J Phys. Rev. Letters
%D August 1986
%P 873

%A G. A. Geist
%T Solving Finite Element Problems with Parallel Multifrontal Schemes
%B Hypercube Multiprocessors 1987
%E M. T. Heath
%I SIAM
%P 656-661
%D 1987

%A G. J. Davis
%A R. E. Funderlic
%A G. A. Geist
%T A Hypercube Implementation of the Implicit Double Shift QR Algorithm
%B Hypercube Multiprocessors 1987
%E M. T. Heath
%I SIAM
%P 619-626
%D 1987

%A R. C. Ward
%A G. A. Geist
%A W. H. Butler
%T Density Functional Theory and Parallel Processing
%B Hypercube Multiprocessors 1987
%E M. T. Heath
%I SIAM
%P 473-484
%D 1987

%A A. D. Solomon
%A V. Alexiades
%A D. G. Wilson
%A G. A. Geist
%A J. Kerper
%T An Enthalpy Method for the Solidification of a Supercooled Liquid
%R ORNL-6217
%D March 1986
%I Oak Ridge National Laboratory
%C Oak Ridge, Tennessee

%A V. Alexiades
%A J. B. Drake
%A G. A. Geist
%A G. E. Giles
%A A. D. Solomon
%A R. F. Wood
%T Mathematical Modeling of Laser-Induced Ultrarapid Melting and Solidification
%R ORNL-6129
%D March, 1986
%I Martin Marietta Energy Systems, Inc.
%C Oak Ridge, Tennessee

%A J. B. Drake
%A G. A. Geist
%A J. Martin
%A C. A. Serbin
%A A. D. Solomon
%A J. Tomlinson
%A P. Grodzka
%A P. McCormick
%A J. Price
%A S. Brown
%T PCMSOL - Simulation Code for a Passive Solar Structure Incorporating Phase Change Materials
%R ORNL-6359
%I Oak Ridge National Laboratory
%D January 1987
%C Oak Ridge, Tennessee

%A J. B. Drake
%A G. A. Geist
%A M. D. Morris
%A A. D. Solomon
%A J. F. Martin
%A J. J. Tomlinson
%T Design of PCM Enhanced Passive Solar Structures
%R ORNL-6281
%I Oak Ridge National Laboratory
%C Oak Ridge, Tennessee
%D March 1987

%A J. A. Clinard
%A G. A. Geist
%T Implementing Fracture Mechanics Analysis on a Distributed-Memory Parallel Processor
%R ORNL/TM-10367
%I Oak Ridge National Laboratory
%C Oak Ridge, Tennessee
%D March 1987

%A R. B. James
%A G. A. Geist
%A R. T. Joung
%A W. H. Christie
%A F. A. Greulich
%T CO2 Laser Processing of Diffusion-induced Lattice Imperfections in Silicon: Experiment and Theory
%J Journal of Applied Physics
%V 62 (7)
%P 2981-2988
%D October 1987

%A G. A. Geist
%A M. T. Heath
%A E. Ng
%T Parallel Algorithms for Matrix Computations
%B Characteristics of Parallel Algorithms
%E R. Douglass
%E D. Gannon
%E L. Jamieson
%I MIT Press
%P 233-251
%D 1987
%O [book chapter]

%A G. A. Geist
%A C. H. Romine
%T LU Factorization Algorithms on Distributed-Memory Multiprocessor Architectures
%J SIAM J. on Scientific and Statistical Computing Vol.9 #4
%P 639-649
%D July 1988
%O [Also published as Technical Report ORNL/TM-10383, March 1987]

%A G. A. Geist
%A R. C. Ward
%A G. J. Davis
%A R. E. Funderlic
%T Finding Eigenvalues and Eigenvectors of Unsymmetric Matricies using a Hypercube Multiprocessor
%B Proceedings of the Third Conference on Hypercube Multiprocessors
%P 1577-1582
%O Pasadena, California, January 19 - 20, 1988

%A G. A. Geist
%A E. Ng
%T A Partitioning Strategy for Parallel Sparse Cholesky Factorization
%R ORNL/TM-10937
%I Oak Ridge National Laboratory
%C Oak Ridge, Tennessee
%D November 1988

%A G. A. Geist
%A E. Ng
%T Task Scheduling for Parallel Sparse Cholesky Factorization
%J International Journal of Parallel Programing Vol. 18 #4
%P 291 - 314
%D 1989

%A G. A. Geist
%A G. J. Davis
%T Finding Eigenvalues and Eigenvectors of Unsymmetric Matricies using a Hypercube Multiprocessor
%R ORNL-TM-10938
%I Oak Ridge National Laboratory
%C Oak Ridge, Tennessee
%D November 1988

%A G. A. Geist
%T Reduction of a General Matrix to Tridiagonal Form
%R ORNL-TM-10991
%I Oak Ridge National Laboratory
%C Oak Ridge, Tennessee
%D January 1989

%A G. A. Geist
%A C. H. Romine
%T LU Factorization on Distributed-Memory Multiprocessors
%B Parallel Processing for Scientific Computing
%E Garry Rodrigue
%I SIAM
%P 15 - 18
%D 1989

%A G. A. Geist
%T Reduction of a general matrix to tridiagonal form using a hypercube multiprocessor
%B Hypercube Concurrent Computers and Applications 1989
%E John L. Gustafson
%I Golden Gate Enterprises
%C Los Altos, CA
%P 665-670
%D 1989

%A G. A. Geist
%A M. T. Heath
%A B. W. Peyton
%A P. H. Worley
%T A Machine-Independent Communication Library
%B Hypercube Concurrent Computers and Applications 1989
%E John L. Gustafson
%I Golden Gate Enterprises
%C Los Altos, CA
%P 565-568
%D 1989

%A G. A. Geist
%A A. Lu
%A E. L. Wachspress
%T Stabilized Gaussian Reduction of an arbitrary matrix from Hessenberg to tridiagonal form
%R ORNL-TM-11089
%I Oak Ridge National Laboratory
%C Oak Ridge, Tennessee
%D June 1989

%A G. A. Geist
%A M. T. Heath
%A B. W. Peyton
%A P. H. Worley
%T PICL: A Portable Instrumented Communication Library - C Reference Manual 
%R ORNL-TM-11130
%I Oak Ridge National Laboratory
%C Oak Ridge, Tennessee
%D July 1990

%A G. A. Geist
%A G. J. Davis
%T Finding Eigenvalues and Eigenvectors of Unsymmetric Matricies using a Distributed-memory Multiprocessor
%J Parallel Computing Vol. 13 #2
%P 199-209
%D February 1990

%A G. A. Geist
%T Parallel Tridiagonalization of a General Matrix using Distributed-memory Multiprocessors.
%B Parallel Processing for Scientific Computing
%E Jack Dongarra
%I SIAM
%C Philadelphia
%P 29-35
%D 1990

%A J. J. Dongarra
%A G. A. Geist
%A C. H. Romine
%T Fortran Subroutines for Computing the Eigenvalues and Eigenvectors of a General Matrix by Reduction to General Tridiagonal Form.
%J ACM Transactions on Mathematical Software.
%P 392-400
%D Dec 1992

%A J. J. Dongarra
%A G. A. Geist
%A C. H. Romine
%T Computing the Eigenvalues and Eigenvectors of a General Matrix by Reduction to General Tridiagonal Form.
%R ORNL-TM-11669
%I Oak Ridge National Laboratory
%C Oak Ridge, Tennessee
%D September 1990

%A G. A. Geist
%A B. W. Peyton
%A W. A. Shelton
%A G. M. Stocks
%T Modeling High-Temperature Superconductors and Metallic Alloys on the Intel iPSC/860.
%B Proceedings of the Fifth Distributed Memory Computing Conference.
%E David W. Walker
%I IEEE
%C Los Alamitos, CA
%P 504-512
%D 1990

%A G. A. Geist
%T ORNL Researchers Develop New Code for Computational Studies of Superconductors.
%J SIAM NEWS Vol. 23 #4
%D July 1990

%A M. T. Heath
%A G. A. Geist
%A J. B. Drake 
%T Early Experience with the Intel iPSC/860 at Oak Ridge National Laboratory.
%R ORNL-TM-11655
%I Oak Ridge National Laboratory
%C Oak Ridge, Tennessee
%D September 1990

%A M. T. Heath
%A G. A. Geist
%A J. B. Drake 
%T Early Experience with the Intel iPSC/860 at Oak Ridge National Laboratory.
%J International Journal of Supercomputer Applications Vol. 5 No. 2
%P 10-26
%D Summer 1991

%A G. A. Geist
%A M. T. Heath
%A B. W. Peyton
%A P. H. Worley
%T A Users' Guide to PICL, a Portable Instrumented Communication Library.
%R ORNL-TM-11616
%I Oak Ridge National Laboratory
%C Oak Ridge, Tennessee
%D October 1990

%A G. A. Geist
%A V. S. Sunderam
%T Network Based Concurrent Computing on the PVM System.
%R ORNL-TM-11760
%I Oak Ridge National Laboratory
%C Oak Ridge, Tennessee
%D July 1991

%A G. A. Geist
%A V. S. Sunderam
%T Network-Based Concurrent Computing on the PVM System.
%J Concurrency: Practice & Experience Vol. 4(4)
%P 293-311
%D June 1992

%A G. A. Geist
%A B. Ginatempo
%A W. A. Shelton
%A G. M. Stocks
%T Parallel Superconductor Code on iPSC/860.
%J The Journal of Supercomputing, 6, 153-162
%D 1992
%O 1990 Gorden Bell Prize Winning Entry 

%A V. S. Sunderam
%A G. A. Geist
%T The PVM System: Supercomputer Level Concurrent Computation on a Network of IBM RS/6000 Powerstations.
%B Scientific Excellence in Supercomputing
%E K. R. Billingsley, H. U. Brown and E. Derohanes
%I Baldwin Press
%C Athens, GA
%D 1992
%O First Prize best paper in the IBM 1990 Supercomputing Competition

%A G. A. Geist
%T Reduction of a General Matrix to Tridiagonal Form
%J SIAM J. Matrix Anal. Appl. Vol. 12 No. 2
%P 362-373
%D April 1991

%A A. L. Beguelin
%A J. J. Dongarra
%A G. A. Geist
%A R. J. Manchek
%A V. S. Sunderam
%T A User's Guide to PVM: Parallel Virtual Machine.
%R ORNL-TM-11826
%I Oak Ridge National Laboratory
%C Oak Ridge, Tennessee
%D April 1991

%A A. L. Beguelin
%A J. J. Dongarra
%A G. A. Geist
%A R. J. Manchek
%A V. S. Sunderam
%T Heterogeneous Network Computing.
%B Proceedings of Second Specialist Seminar on Parallel Digital Processors.
%I The Institution of Electrical Engineers
%C London
%O (Paper presented in Lisbon, Portugal)
%D April 15-19, 1991

%A A. L. Beguelin
%A J. J. Dongarra
%A G. A. Geist
%A R. J. Manchek
%A V. S. Sunderam
%T Solving Computational Grand Challenges using a Network of Heterogeneous Supercomputers.
%B Proceedings of Fifth SIAM Conference on Parallel Processing.
%E Dongarra, Kennedy, Messina, Sorensen, Voigt
%I SIAM
%C Philadelphia
%P 596-601
%D 1992

%A G. A. Geist
%A E. R. Jessup
%T Parallel Implementation of a Nonsymmetric Tridiagonal Eigensolver
%B Proceedings of Fifth SIAM Conference on Parallel Processing.
%E Dongarra, Kennedy, Messina, Sorensen, Voigt
%I SIAM
%C Philadelphia
%P 11-15
%D 1992

%A G. A. Geist
%A V. S. Sunderam
%T The PVM System: Supercomputer Level Concurrent Computation on a Heterogeneous Network of Workstations.
%B The Sixth Distributed Memory Computer Conference Proceedings.
%E Quentin Stout and Michael Wolfe
%I IEEE
%C Los Alamitos, CA
%P 258-261
%D 1991

%A A. L. Beguelin
%A J. J. Dongarra
%A G. A. Geist
%A R. J. Manchek
%A V. S. Sunderam
%T Heterogeneous Network Supercomputing
%J Supercomputer Review Vol. 4(9)
%D September 1991
%P 44-45

%A W. M. Temmerman
%A Z. Szotek
%A W. H. Purvis
%A G. M. Stocks
%A G. A. Geist
%A H. Winter
%T Parallel Band Structure Calculations
%B Proceedings of the First Workshop on Vector and Parallel Computing
   of Electronic Properties of Solids
%P 83-93
%D 1992
%O (Presented in Messina Italy May 29-31, 1991)
%O Supplement to the Atti Accademia Peloritana dei Pericolanti
    Classe I di Scienze Fis. Mat. e Nat. Volume LXIX (1991)


%A A. L. Beguelin
%A J. J. Dongarra
%A G. A. Geist
%A R. J. Manchek
%A V. S. Sunderam
%T Graphical Development Tools for Network-Based Concurrent Supercomputing
%J Proceedings of Supercomputing '91 Conference
%I IEEE
%P 435-445
%D 1991
%O Presented in Albuquerque NM November 18-22

%A A. L. Beguelin
%A J. J. Dongarra
%A G. A. Geist
%A R. J. Manchek
%A K. Moore
%A V. S. Sunderam
%A R. Wade
%T HeNCE: Graphical Development Tools for Network-Based Concurrent
%J Proceedings of SHPCC
%I IEEE
%D 1992
%O Presented in Williamsburg VA April 27-29

%A G. A. Geist
%T Distributed Computing replacing Supercomputing at ORNL
%J C&T News
%D September 1992

%A G. M. Stocks
%A D. M. Nicholson
%A W. A  Shelton
%A G. A. Geist
%T The Electronic Structure and Phase Stability of Random Alloys
%B Computing at the Leading Edge: Research in the Energy Sciences
%E A. Mirin and P. T. van Dyke
%P 86 - 93
%O UCRL-TB-111084
%D 1993

%A G. M. Stocks
%A D. M. Nicholson
%A W. A  Shelton
%A G. A. Geist
%A F. J. Pinski
%A A. Barbieri
%A B. L. Gyorffy
%A B. Ginatempo
%T First Principles Theory of Phase Stability Fermi-Surface Nesting 
   Pre-Martensitic Phenomenon in Beta-Phase NiAl
%B Proceedings of NATO Advanced Research Workshop on Ordered Intermetallics
   Physical Metallurgy and Mechanical Behavior, eds. C. T. Liu, K. W. Cahn
   and G. Sauthoff, pages 15-36
%D 1992
%O Kluwer Academic Publishers


%A G. M. Stocks
%A D. M. Nicholson
%A W. A  Shelton
%A G. A. Geist
%A F. J. Pinski
%A M. Sluter
%A P. A. Turchi
%A Z. Szotek
%A W. M. Temmerman
%T Ordering Energies and Mechanisms in Beta-Phase NiAl
%B Kinetics of Ordering Transformations in Metals, eds. H. Chen and V. K.
   Vasudeuan, pages 101-129
%D 1992
%O The Metals Society

%A B. Ginatempo
%A E. Bruno
%A W. M. Temmerman
%A Z. Szotek
%A F. J. Pinski
%A W. A  Shelton
%A G. A. Geist
%A G. M. Stocks
%T Parallel Implementation of the Relativistic KKR-CPA Method
%B Proceedings of the First Workshop on Vectorial and Parallel Computing
   of Electronic Properties of Solids, eds. A. Stancanelli, E. S.
   Giuliano and B. Ginatempo
%D 1992
%O Supplement to the Atti Delle Accademia Peloritara Universita Degli Studi
    Di Messina

%A B. Ginatempo
%A G. A. Geist
%A G. M. Stocks
%A W. A  Shelton
%A E. Bruno
%T A high performance code to calculate the electronic properties 
   of metals and alloys
%B Proceedings of the First Workshop on Vectorial and Parallel Computing
   of Electronic Properties of Solids, eds. A. Stancanelli, E. S.
   Giuliano and B. Ginatempo
%P 61-82
%D 1992

%A J. J. Dongarra
%A G. A. Geist
%A R. J. Manchek
%A V. S. Sunderam
%T Integrated PVM Framework Supports Heterogeneous Network Computing
%J Computers in Physics Vol. 7(4)
%D March/April 1993
%P 166-175

%A J. J. Dongarra
%A G. A. Geist
%A R. J. Manchek
%A W. Jiang      
%T Using PVM 3.0 to run Grand Challenge Applications on a Heterogeneous Network of Parallel computers
%B Proceedings of Sixth SIAM Conference on Parallel Processing.
%E R. Sincovec
%I SIAM
%C Philadelphia
%P 873-877
%D 1993

%A Ken Kliewer
%A John Drake
%A Al Geist
%A Pat Worley
%A Malcolm Stocks
%A Dick Ewing
%T ORNL CCS Program
%J International Journal of Supercomputer Applications Vol. 7 No. 1 
%P 3-14
%D Spring 1993

%A A. L. Beguelin
%A J. J. Dongarra
%A G. A. Geist
%A R. J. Manchek
%A V. S. Sunderam
%T Heterogeneous Network Computing
%B Proceedings of Sixth SIAM Conference on Parallel Processing.
%E R. Sincovec
%I SIAM
%C Philadelphia
%P 854-861
%D 1993

%A G. A. Geist
%T Software Tools for Computational Grand Challenges
%B Proceedings of the Salishan Conference 
%D March 1993
%O (never received a copy)

%A G. A. Geist
%A V. S. Sunderam
%T The Evolution of the PVM Concurrent Computing System
%B Proceedings of Compcon`93 Conference.
%I IEEE
%C Los Alamitos, CA
%D February 1993
%P 545-553

%A V. S. Sunderam
%A G. A. Geist
%A J. J. Dongarra
%A R. J. Manchek
%T The PVM Concurrent Computing System: Evolution, Experiences, and Trends
%J Parallel Computing Vol. 20(4)
%D April 1994
%P 531-546

%A G. A. Geist
%A A. L. Beguelin
%A J. J. Dongarra
%A R. J. Manchek
%A V. S. Sunderam
%T PVM 3 User's Guide and Reference Manual
%R ORNL-TM-12187
%I Oak Ridge National Laboratory
%C Oak Ridge, Tennessee
%D July 1993

%A A. L. Beguelin
%A J. J. Dongarra
%A G. A. Geist
%A V. S. Sunderam
%T Visualization and Debugging in a Heterogeneous Environment
%J IEEE COMPUTER Vol. 26 No. 6
%P 88-95
%D June 1993

%A A. L. Beguelin
%A J. J. Dongarra
%A G. A. Geist
%A R. J. Manchek
%A K. Moore
%T HeNCE: A Heterogeneous Network Computing Environment
%J Scientific Programming Vol. 3 No. 1
%P 49-60

%A A. L. Beguelin
%A J. J. Dongarra
%A G. A. Geist
%A R. J. Manchek
%A K. Moore
%T PVM and HeNCE: Tools for Heterogeneous Network Computing
%B Software for Parallel Computation
%E J. Kowalik and L. Grandinetti
%I Springer Verlag, NATO ASI Series, Series F.
%P 91-100
%D 1993

%A A. L. Beguelin
%A J. J. Dongarra
%A G. A. Geist
%A R. J. Manchek
%A V. S. Sunderam
%T PVM and HeNCE: Tools for Network-Based Concurrent Computing
%B Environments and Tools for Parallel Scientific Computing
%E J. Dongarra and B. Tourancheau
%I North Holland, Advances in Parallel Computing, Vol. 6
%P 49-60
%D 1993

%A G. A. Geist
%T PVM3: Beyond Network Computing
%B Lecture Notes in Computer Science
%I Springer Verlag
%O Proceedings of the 2nd Int'l ACPC Conference
%D October 1993
%P 194-203

%A G. A. Geist
%T Programming for Heterogeneous Networks
%B Proceedings of the ICASE/LaRC Short Course on Parallel Computation
%I NASA?
%D July 1993

%A MPI Forum (G. A. Geist is member/co-author)
%T MPI: A Message Passing Interface
%J Proceedings of Supercomputing '93 Conference
%I IEEE
%D 1993
%P 878-885
%O Presented in Portland November 19

%A Michael Berry
%A Al Geist
%A Doug Sept
%T Task Queue Management for PVM
%J Journal of Parallel and Distributed Computing
%O (Submitted July 1993)

%A MPI Forum (G. A. Geist is member/co-author)
%T MPI: A Message-Passing Interface Standard
%J International Journal of Supercomputer Application Vol. 8 No. 3/4
%P 165-416
%D 1994

%A J. J. Dongarra
%A G. A. Geist
%A R. J. Manchek
%A V. S. Sunderam
%T Supporting Heterogeneous Network Computing: PVM
%J Chemical Design Automatimation News, Vol. 8 No. 9/10
%P 36-42
%D October 1993

%A A. L. Beguelin
%A J. J. Dongarra
%A G. A. Geist
%A R. J. Manchek
%A K. Moore
%A P. Newton
%A V. S. Sunderam
%T HeNCE: A User's Guide Version 2.0
%R University of Tennessee Technical Report
%D 1994

%A G. W. Howell
%A G. A. Geist
%A N. Diaa
%T Gaussiam Reduction to a Similar Near-Tridiagonal Hessenberg form: Algorithm BHESS
%J ACM TOMS
%O (Submitted March 94, accepted pending revisions Sept 94)

%A G. A. Geist
%T Cluster Computing: The Wave of the Future?
%B Lecture Notes in Computer Science 879 Parallel Scientific Computing
%E J. Dongarra and Jerzy Wasniewski
%I Springer Verlag
%O Proceedings of the PARA94 Conference
%P 236-246
%D June, 1994


%A G. A. Geist
%T PVM a Platform for Portable Distributed Computing
%B Proceedings High Performance Computing '94 Conference
%I National Supercomputing Research Center, University of Singapore
%D Sept. 1994
%P 15-21

%A G. A. Geist
%A A. L. Beguelin
%A J. J. Dongarra
%A W. Jiang
%A R. J. Manchek
%A V. S. Sunderam
%B PVM: Parallel Virtual Machine -
   A Users Guide and Tutorial for Network Parallel Computing.
%I MIT Press
%D 1994
%O (Book)

%A A. L. Beguelin
%A J. J. Dongarra
%A G. A. Geist
%A V. S. Sunderam
%T Visualization and Debugging in a Heterogeneous Environment
%B Multiprocessor Performance Measurement and Evaluation
%E Laxmi Bhuyan and X. Zhang.
%I IEEE Computer Society Press
%D 1994
%O (Reprinted from IEEE COMPUTER)

%A A. L. Beguelin
%A J. J. Dongarra
%A G. A. Geist
%A V. S. Sunderam
%T Visualization and Debugging in a Heterogeneous Environment
%B Programming Languages for Parallel Processing
%E D. B. Skillicorn and D. Talia
%I IEEE Computer Society Press
%D 1994
%O (Reprinted from IEEE COMPUTER)

%A G. A. Geist
%T New Pvm version has many new features
%J HPCwire Magazine Vol. 3, No. 22
%D June 10, 1994
%O (no page numbers)

%A H. Zhou
%A G. A. Geist
%T "Receiver Makes Right" Data Conversion in PVM
%B Proceedings of 14th Anuual IEEE Conference on Computers and Communication
%P 458-464
%O 1995

%A H. Zhou
%A G. A. Geist
%T Faster Message Passing in PVM
%B Proceedings of 9th International Parallel Processing Symposium (IPPS'95)
%P 67-73
%O 1995

%A G. W. Howell
%A G. A. Geist
%T Rounding Error in LR Iteration for Multipliers Bounded in the Mean
%O (draft)

%A P. Papadopoulos
%A R. Manchek
%A G. A. Geist
%T Context, Name Service, Static Groups for PVM
%B Proceedings 1995 PVM User's Group Meeting, Pittsburg, PA
%D May 1995
%O (Proceedings published on-line)

%A R. F. Wood 
%A G. A. Geist
%A C. L. Liu
%T Two-dimensional Modeling of Pulsed-laser Irradiated a-Si and other Materials
%J Physical Review B
%V 53
%P 15863-15870
%D 1996

%A G. A. Geist
%A J. Kohl
%A P. Papadopoulos
%T Visualization, Debugging, and Performance in PVM
%B Debugging and Performance Tuning for Parallel Computing Systems
%E Simmons, Hayes, Brown, Reed
%I IEEE Computer Society
%P 65-78
%D Oct 1994

%A A. L. Beguelin
%A J. J. Dongarra
%A G. A. Geist
%A R. J. Manchek
%A V. S. Sunderam
%T Recent Enhancements to PVM
%J International Journal of Supercomputer Applications Vol 9, No 2.
%P 108-127
%D Summer 1995

%A G. A. Geist
%T PVM: Faster and Easier to Use
%B Proceedings of the Convex Users Group Meeting
%P 352-401
%D March 1995

%A G. A. Geist
%A J. A. Kohl
%T XPVM 1.0 Users Guide
%R ORNL-TM-12981
%I Oak Ridge National Laboratory
%C Oak Ridge, Tennessee
%D May 1995

%A A. Beguelin
%A J. Dongarra
%A A. Geist
%A R. Manchek
%A S. Otto
%A J. Walpole
%T PVM: Experiences, Current Status and Future Direction
%B Proceedings of Supercomputing '93
%P 765-6
%% 1993

%A G. W. Howell
%A G. A. Geist
%T Accumulation of Rounding Error in Exceptional Shift LR Iteration
%D 1995
%O (draft)

%A G. W. Howell
%A G. A. Geist
%T Necessity of High Precision Arithmetic for Large-Scale Computations
%B Proceedings of Neural, Parallel and Scientific Computations, Volume 1.
%D 1995

%A J. A. Kohl
%A G. A. Geist
%T The PVM 3.4 Tracing Facility and XPVM 1.1
%D June 1995
%O (Proceedings HICSS-29: Twenty-Nineth Hawaii
    International Conference of System Sciences)

%A G. A. Geist
%T Message-passing: Portable, Efficient, Easy
%J ANS TRANSACTIONS 
%P 164-166
%D October 1995
%O (Presented at ANS 1995 Winter Meeting)

%A Honbo Zhou
%A Al Geist
%T LPVM: A Step Towards Multithread PVM
%J Journal of Parallel and Distributed Computing
%D July 1995
%0 (submitted special issue on Multithreading for Multiprocessors)

%A G. W. Howell
%A G. A. Geist
%T Direct Reduction to a Similar Near-Tridiagonal Form
%B Parallel and Distributed Computing Systems
%E A. Elmaghraby and R. Ammar
%I ISCA, 8820 Six Forks Rd. Raleigh, NC.
%P 426-432
%D September 1995

%A G. W. Howell
%A G. A. Geist
%T A Posteriori Estimates for the Backward Error of Reduction by Gaussian Transformations to Similar Banded Hessenberg
%D 1995
%O (draft)

%A G. A. Geist
%A J. A. Kohl
%A P. Papadopoulos
%T New Features of PVM 3.4 and Beyond
%B EuroPVM'95
%E Dongarra, Gengler, Tourancheau, and Vigouroux
%I Hermes, Paris
%P 1-10
%D Sept. 1995

%A MPI Forum
%B MPI: A Message Passing Interface Standard
   (version 1.1)
%I Convex Computer Corporation, Richardson TX
%D October 1995

%A G. A. Geist
%A J. A. Kohl
%A P. M. Papadopoulos
%A B. D. Semeraro
%A W. A. Shelton
%T Early Experiences with Distributed Supercomputing on I-WAY:
   First Principles Materials Science and Parallel Acoustic Wave Propagation
%J International Journal of Supercomputer Applications 
%D December 1995

%A A. H. Karp
%A M. T. Heath   
%A G. A. Geist
%T 1995 Gordon Bell Prize Winners
%J IEEE COMPUTER Vol. 29 No. 1
%P 79-85
%D January 1996

%A G. A. Geist
%T CRADA ORNL 91-0046B Final Report: Assessment of IBM Advanced Computing Architectures
%R ORNL-TM-13180
%I Oak Ridge National Laboratory
%C Oak Ridge, Tennessee
%D January 1996

%A J. A. Kohl
%A G. A. Geist
%T The PVM 3.4 Tracing Facility and XPVM 1.1
%B Proceedings 29th Annual International Conference on System Sciences
%D January 1996

%A Al Geist
%A William Gropp
%A Steve Huss-Lederman
%A Amdrew Lumsdaine
%A Ewing Lusk
%A William Saphir
%A Tony Skjelum
%A Marc Snir
%T MPI-2: Extending the Message-Passing Interface
%B Euro-Par '96 Parallel Processing
%E Luc Bouge and Pierre Fraigniaud and Anne Mignotte and Yves Robert
%I Springer Verlag, Lecture Notes in Computer Science Vol. 1 No. 1123
%P 128-135
%D 1996

%A J. M. Donato
%A G. A. Geist
%T Collective Communication Routines in PVM
%R ORNL-TM-13228
%I Oak Ridge National Laboratory
%C Oak Ridge, Tennessee
%D May 1996

%A G. A. Geist
%A J. A. Kohl
%A P. M. Papadopoulos
%T PVM and MPI: A Comparison of Features
%J Calculateurs Paralleles Vol. 8 No. 2
%P 137-150
%D June 1996

%A Ed D'Azevedo
%A Jack Dongarra
%A Tom Dunigan
%A Al Geist
%A Cuck Romine
%A Pat Worley
%T Algorithms, Tools, and Software to Aid in the Use of High-Performance Computers
%J ORNL Review
%P xx-yy
%D Sept 1996

%A G. A. Geist
%T Advanced Programming in PVM
%B Parallel Virtual Machine - EuroPVM'96 
%E A. Bode, J. Dongarra, T. Ludwig, and V. Sunderam
%I Springer Verlag, Lecture Notes in Computer Science Vol. 1 No. 1156
%P 1-6
%D July 1996


%A G. A. Geist
%A J. A. Kohl
%A P. M. Papadopoulos
%T CUMULVS: Providing Fault-Tolerance, Visualization, and Steering of Parallel Applications
%J International Journal of Supercomputer Applications and High Performance Computing Vol. 11 No. 3
%P 224-236
%D Fall 1997

%A A. H. Karp
%A G. A. Geist
%A D. Bailey
%T 1996 Gordon Bell Prize Winners
%J IEEE COMPUTER Vol. 30 No. 1
%D January 1997

%A P. M. Papadopoulos
%A G. A. Geist
%T Wide-Area ATM Networking for Large-Scale MPPs
%J Proceedings of Eight SIAM conference on Parallel Processing
%D March 1997

%A P. M. Papadopoulos
%A G. A. Geist
%T Wide-Area ATM Networking for Large-Scale MPPs
%J Proceedings of 1997 Cluster Computing Conference
%D March 1997

%A Graham Fagg
%A Jack Dongarra
%A Al Geist
%T PVMPI provides Interoperability between MPI Implementations
%J Proceedings of Eight SIAM conference on Parallel Processing
%D March 1997

%A J. A. Kohl
%A P. M. Papadopoulos
%A G. A. Geist
%T CUMULVS: Collaborative Infrastructure for Developing Distributed Simulations
%J Proceedings of Eight SIAM conference on Parallel Processing
%D March 1997

%A Jeffrey Brown
%A Al Beist
%A Cherri Pancake
%A Diane Rover
%T Software Tools for Developing Parallel Applications (Part 1)
%J Proceedings of Eight SIAM conference on Parallel Processing
%D March 1997

%A Jeffrey Brown
%A Al Beist
%A Cherri Pancake
%A Diane Rover
%T Software Tools for Developing Parallel Applications (Part 2)
%J Proceedings of Eight SIAM conference on Parallel Processing
%D March 1997

%A Honbo Zhou
%A Al Geist
%T LPVM: A Step Towards Multithread PVM
%J Concurrency Practice and Experience Vol.10(0) 1-10 
%D 1998

%A Tim Sheehan
%A Dave Greenberg
%A Al Geist
%A Phil Papadopoulos
%T Seamless Computing Environment
%J Proceedings of 1997 Intel Supercomputer User Group meeting.
%D May 1997

%A MPI Forum (G. A. Geist is member/co-author)
%T MPI-2: Extentions to the Message-Passing Interface Standard
%J International Journal of Supercomputer Application
%O (submitted by invitation)
%D 1997

%A Al Geist
%T Advanced Capabilities in PVM 3.4
%J Proceedings of EuroPVM-MPI 97
%D November 1997

%A Graham Fagg
%A Jack Dongarra
%A Al Geist
%T Heterogeneous MPI application interoperation and process  management under PVMPI
%J Proceedings of EuroPVM-MPI 97
%D November 1997

%A J.A Kohl
%A G.A. Geist
%A P.M. Papadopoulos
%A S. Scott
%T Beyond PVM 3.4: What We've Learned, What's Next, and Why
%J Proceedings of EuroPVM-MPI 97
%D November 1997

%A Graham Fagg
%A Keith Moore
%A Jack Dongarra
%A Al Geist
%T SNIPE
%J Proceedings of SC97 Conference
%D December 1997

%A David S. Watkins
%A Gary W. Howell
%A G. A. Geist
%T Calculating Eigenvalues of Large Matrices using the BR Algorithm
%J Proceedings of SIAM Conference on Applied Linear Algebra
%D November 1997

%A Al Geist
%T PVM 3.4 Makes a Big Leap Forward in Heterogeneous Network Computing
%J Parallel Tools Digest
%D August 1997
%O Electronic Magazine.

%A Jack Dongarra
%A Al Geist
%A Jim Kohl
%A Philip Papalopoulos
%A Vaidy Sunderam
%T HARNESS: Heterogeneous Adaptable Reconfigurable Networked Sustems
%J Proceedings of HDPC'98
%D February 1998

%A Mauro Migliardi
%A Jack Dongarra
%A Al Geist
%A Vaidy Sunderam
%T Dynamic Reconfiguration and Virtual Machine Management in the Harness Metacomputing System
%J Proceedings of Second International Symposium on Computing in Object-orientedParallel Environments
%O submitted May 1998

%A Al Geist
%A Jack Dongarra
%A Graham Fagg
%A Paul Gray
%A Jim Kohl
%A Mauro Migliardi
%A Philip Papalopoulos
%A Stephen Scott
%A Vaidy Sunderam
%T HARNESS Distributed Virutal Machine
%J International Journal on Future Generation Computer Systems 616 (1999) 
%P 1-12

%A Al Geist
%T Harness: The Next Generation Beyond PVM
%B Recent Advances in Parallel Virtual Machine and Message Passing Interface
%E Alexandrov and Dongarra
%P 74-83
%I Springer LNCS 1497
%O September 1998

%A Stephen Scott
%A Markus Fischer
%A Al Geist
%T PVM on Windows and NT Clusters
%B Recent Advances in Parallel Virtual Machine and Message Passing Interface
%E Alexandrov and Dongarra
%P 74-83
%I Springer LNCS 1497
%O September 1998

%A Mauro Migliardi
%A Jack Dongarra
%A Vaidy Sunderam
%A Al Geist
%T Dynamic Reconfiguration and Virtual Machine Management in the Harness Metacomputing System
%J Proceedings of International Symposium on Computing in Object-oriented Parallel Environments
%O December 1998

%A Al Geist
%A Philip Papalopoulos
%T Symmetric Distributed Control in Network-based Parallel Computing
%J Journal of Computer Communications
%O Invited (Submitted July 1998)

%A Vaidy Sunderam
%A Al Geist
%T Heterogeneous Parallel and Distributed Computing
%J Journal of 
%O Invited (Submitted February 1999)

%A J.A Kohl
%A G.A. Geist
%A P.M. Papadopoulos
%A S. Scott
%T Beyond PVM 3.4: What We've Learned, What's Next, and Why
%J Future Generation Computer Systems Vol 15 No. 5/6
%P 571-582
%D July 1999

%A G. A. Geist
%A Gary W. Howell
%A David S. Watkins
%T The BR Eigenvalue Algorithm
%J SIMAX 20 (4)
%P 1083-1098
%D July 1999

%A Rob Armstrong
%A Dennis Gannon
%A Al Geist
%A Kate Keahey
%A Scott Kohn
%A Lois Mcinnes
%A Steve Parker
%A Brent Smolinski
%T Toward a Common Component Architecture for High-Performance Scientific Computing
%J Proceedings of Parallel and Distributed Computing Conference 
%D July 1999

%A Rob Armstrong
%A Dennis Gannon
%A Al Geist
%A Kate Keahey
%A Scott Kohn
%A Lois McInnes
%A Steve Parker
%T Toward a Common Component Architecture for High Performance Scientific Computing
%J Proceedings of HPDC'99
%O August 1999

%A James Kohl
%A Al Geist
%T Monitoring and Steering of Large-Scale Distributed Simulations
%J Proceedings of Applied Modeling and Simulation Conference (AMS'99)
%O September 1999


%A Al Geist
%A Jens Schwidler
%T Managing Multiple Multi-user PC Clusters
%J Journal of Parallel and Distributed Computing
%O (Submitted Nov. 1999)

%A Al Geist
%A Paul Gray
%A Stephen Scott
%A Vaidy Sunderam
%T Bringing Cross-Cluster Functionality to Processes Through the Merging and Splitting of Virtual Environments.
%J Journal of Parallel and Distributed Computing
%O (Submitted Nov. 1999)

%A Mark Baker
%A Stephen Scott
%A Al Geist
%A Logan Browne
%T GigaBit Performance under NT
%J IPPS
%O (Submitted December 1999)

%A Al Geist
%A Jim Kohl
%A Stephen Scott
%A Philip Papalopoulos
%T HARNESS: Adaptable Virtual Machine Environment for Heterogeneous Clusters
%J Parallel Processing Letters Vol. 9 No. 2 
%P 253-273
%D 1999

%A Al Geist
%A Stephen Scott
%A Jens Schwidler
%T M3C -- An Architecture for Monitoring and Managing Multiple Clusters
%J Proceedings of 12th IASTED Conference on Parallel and Distributed Computing Systems.
%P 117-123
%D August 2000

%A Mark Baker
%A Stephen Scott
%A Al Geist
%A L. Browne
%T GigaBit Performance under NT
%J Proceedings of International Workshop on Personal Computer based Workstations (PC-NOW 2000).
%D May 2000

%A Stephen Scott
%A Jens Schwidder
%A Al Geist
%A Brian Luethke
%A Ray Flanery
%T The Scalable System Administrator: via C3 & M3C tools
%J Proceedings of Second International Conference on Cluster-Based Computing
%D May 2000

%A Stephen Scott
%A Brian Luethke
%A Al Geist
%A Ray Flanery
%T Cluster Command & Control (C3) Tools Suite
%J Proceedings of Third Distributed and Parallel Systems Conference (DPYS2000)
%O June 2000

%A Al Geist
%A Brian Luethke
%A Stephen Scott
%T M3C: a web-based management tool for federated clusters
%J Proceedings of IEEE International Conference on Cluster Computing (Cluster 20
00)
%D December 2000

%A Al Geist
%T PVM and MPI: What else is needed for Cluster Computing?
%B Recent Advances in PVM and MPI
%E Dongarra, Kacsuk, Podhorszki
%P 1-3
%I Springer LNCS 1908
%D September 2000

%A Nagiza Samatova
%A George Ostrouchov
%A Al Geist
%A Anatoli Melechko
%T RACHET: An Efficient Cover-based Merging of Clustering Hierarchies from Distributed Datasets
%J Journal on Distributed and Parallel Databases Vol. 11, No. 2
%D March 2002

%A Nagiza Samatova
%A George Ostrouchov
%A Al Geist
%A Anatoli Melechko
%T RACHET: An Efficient Parallel Algorithm for Distributed Data Mining
%J Proceedings First SIAM International Conference on Data Mining
%D April 2001

%A Y. Qu 
%A G. Ostrouchov 
%A N.F. Samatova 
%A A. Geist  
%T Principal Component Analysis for Dimension Reduction in Massive Distributed Data Sets 
%O (submitted to the Second SIAM International Conference on Data Mining, April 2002.)

%A Stephen Scott
%A Mike Brim
%A Al Geist
%A Brian Luethke
%A Jens Schwidder
%T M3C: Managing and Monitoring Multiple Clusters
%J Proceedings International Symposium on Cluster Computing and the Grid
%D May 2001

%A Al Geist 
%A Stephen Scott 
%T Parallel Programming with PVM 
%B Building a Linux Beowulf
%E Thomas Sterling
%I MIT Press
%D November 2001
%O (Book chapter)

%A Al Geist 
%A Jim Kohl
%T Fault Tolerant and Adaptive Programs with PVM
%B Building a Linux Beowulf
%E Thomas Sterling
%I MIT Press
%D November 2001
%O (Book chapter)

%A Al Geist 
%A Stephen Scott 
%T Parallel Programming with PVM 
%B Building a Windows 2000 Beowulf
%E Thomas Sterling
%I MIT Press
%D November 2001
%O (Book chapter)

%A Al Geist 
%A Jim Kohl
%T Fault Tolerant and Adaptive Programs with PVM
%B Building a Windows 2000 Beowulf
%E Thomas Sterling
%I MIT Press
%D November 2001
%O (Book chapter)

%A Stephen Scott
%A Brian Luethke
%A Al Geist
%A Ray Flanery
%T Cluster Command & Control (C3) Tools Suite
%J Parallel and Distributed Computing Practices.
%D 2001
%O (to appear)

%A Al Geist
%T Building a Foundation for the Next PVM: Petascale Virtual Machines
%B Recent Advances in Parallel Virtual Machine and Message Passing Interface
%E Cotronis and Dongarra
%P 2-7
%I Springer LNCS 2131
%D September 2001

%A Nagiza Samatova 
%A Al Geist 
%A George Ostrouchov 
%A Anatoli Melechko
%T Parallel Out-of-core Algorithm for Genome-Scale Enumeration of Metabolic Systemic Pathways
%J Proceedings of High Performance Computational Biology Conference
%D December 2001
%o (Accepted)

%A Al Geist 
%T Developing Supercomputer Tools for Scientists
%J ORNL Review
%D December 2001

%A Al Geist 
%T ORNL Leads effort to build better Supercomputer Centers
%J ORNL Review
%D December 2001

%A Al Geist 
%T Tuning PVM 3.4 for Large-Scale Clusters
%J IEEE Task Force on Cluster Computing Newsletter
%D May 2002 

%A Faisal Abu-Khzam
%A Nagiza Samatova
%A George Ostrouchov
%A Michael Langston
%A Al Geist
%T Distributed Dimension Reduction Algorithms for Widely Dispersed Data
%J Proceedings of 2002 IASTED Conference on Parallel and Distributed Computing and Systems.
%D June 2002

%A J. B. White III
%A A. S. Bland
%A G. A. Geist
%A W. R. Wing
%T A Netowrking Strategy for Peta-Scale Science within the DOE Office of Science
%J Proceedings High Performance Network Planning Workshop
%D August 2002

%A Al Geist
%A Christian Engelmann
%T Development of Naturally Fault Tolerant Algorithms for Computing on 100,000 Processors
%J Parallel Computing
%D December 2002
%O (submitted)

%A James Myers
%A Al Geist
%A Jens Schwidder
%A Alan Chappell
%A Mathew Elder
%T Re-integrating the Research Record
%J Computers in and Science and Engineering Vol. 5 (No. 3)
%D May/June 2003
%P 44-50 

%A Grant Heffelfinger
%A Al Geist
%A Anthoy Martino
%A Andrey Gorin
%A Ying Xu
%A Mark Rintoul
%A et al
%T Carbon Sequestration in Synechococcus SP: From Molecular Machines to Hierarchical Modeling
%J OMICS Journal of Integrated Biology Vol. 6, Num. 4
%P 305-331
%D December 2002

%A Al Geist 
%T Parallel Virutal Machine
%B Beowulf Cluster Computing with Linux
%E Bill Gropp
%I MIT Press
%D July 2003
%O (Book chapter)

%A Al Geist 
%A Jim Kohl
%T Fault Tolerant and Adaptive Programs with PVM
%B Beowulf Cluster Computing with Linux
%E Bill Gropp
%I MIT Press
%D July 2003
%O (Book chapter)

%A Al Geist 
%T System Software and Ultrascale Simulation
%B SCales Report
%E David Keyes
%I Published on DOE Web site
%D August 2003
%O (Book chapter)

%A Al Geist
%T Progress Towards a Petascale Virtual Machines
%B Recent Advances in Parallel Virtual Machine and Message Passing Interface
%E Laforenza and Dongarra
%I Springer LNCS 2840
%P 10-15
%D September 2003

%A Grant Heffelfinger and Al Geist
%T Computation and GTL
%B DOE Computational Biology Primer
%E Ying Xu
%D June 2003
%0 (Book Chapter To appear)

%A Al Geist
%A Thomas Zacharia
%A Reinhold Mann
%A George Michaels
%A Grant Heffelfinger
%T Report on three Genomes to Life Workshops Data Infrastructure, Modeling, and structure prediction
%J DOE Genomes to Life Website
%D September 2003

%A Byung-Hoon Park
%A George Ostrouchov
%A Gong-Xin Yu
%A Al Geist
%A Andrey Gorin
%A Nagiza Samatova
%T PICUPP: Protein Interaction Classification by Unlikely Profile Pair
%J Proceedings of 2003 IEEE Bioinformatics Conference
%D June 2003 

%A Gong-Xin Yu
%A Al Geist
%A George Ostrouchov
%A Nagiza Samatova
%T An SVM-based Algorithm for Identification of Photosynthesis-specific genome features
%J Proceedings of 2003 IEEE Bioinformatics Conference
%D June 2003 

%A Byung-Hoon Park
%A George Ostrouchov
%A Gong-Xin Yu
%A Al Geist
%A Andrey Gorin
%A Nagiza Samatova
%T Inference of Protein-Protein Interactions by Unlikely Profile Pair
%J Proceedings of Third IEEE Conference on Data Mining
%D November 2003 

%A Arkin
%A Ambrosiano
%A Babnigg
%A Frank
%A Geist
%A Giometti
%A Jacobsen
%A Samatova
%A Slater
%A Taylor
%T Compilation and Review of Data Standards and Application to the Genomes to Life Program
%J DOE GTL Technical Report
%D January 2004 

%A Byung-Hoon Park
%A Munavalli Rajesh
%A Al Geist
%A Nagiza Samatova
%T Analysis of Protein Interface Sites through Separate Data Spaces
%J Proceedings of SIAM International Conference on Data Mining
%D April 2004 

%A Nagiza Samatova
%A Gong-Xin Yu
%A Praveen Chandramohan
%A Byung-Hoon Park
%A George Ostrouchov
%A Al Geist
%A Natalia Maltsev
%T Hierarchical feature extraction based approach to functional differentiation of highly homologous protein functional groups 
%J Bioinfrmatics Journal (submitted)
%D May 2004 

%A Pratul Agarwal
%A Al Geist
%A Andre Gorin
%T On Protein Dynamics and Enzymatic Catalysis: Investigating the peptidyl-prolyl cic/trans isomerization activity of cyclohiln A
%J Journal of American Chemical Society 
%D (Accepted) June 2004 

%A Al Geist
%T PVM Grids to Self-Assembling Virtual Machines
%B Recent Advances in Parallel Virtual Machine and Message Passing Interface
%E Kacsuk and Dongarra
%I Springer LNCS 
%D September 2004

%A Pratul Agarwal
%A Al Geist
%T Designing a Novel Algorithm for Simulating Protein Folding on Next Generation Supercomputers
%J Journal of Parallel Computing
%D (Submitted) September 2004 

%A Byung-Hoon Park
%A Munavalli Rajesh
%A Gong-Xin Yu
%A Al Geist
%A Nagiza Samatova
%T Selective Prediction of Protein Interface Sites using Ensemble of Classifiers
%J Bioinformatics Journal 
%D (Submitted) Septmber 2004 

%A Praveen Chandramohan
%A Guruprasa Kora
%A Nagiza Samatova
%A David Bauer
%A Robert Ross
%A Robert Lathham
%A Rajeev Thakur
%A James Ahrens
%A Arie Shoshani
%A Al Geist
%T MPI-IO Parallel Writer for Large-Scale Visualization with PVTK
%J Journal of Parallel Computing 
%D (Submitted) Septmber 2004 

%A Al Geist
%A B. Bode
%A R. Bradshaw
%A N. Desai
%A P. Hargrove
%A D. Jackson
%A S. Jackson
%A E. Lusk
%A W. McLendon
%A R. Oldfield
%A S. Scott
%A C. Steffen
%T Scalable Systems Software: A component-based approach
%J Journal of Physics
%N 16
%P 546-550
%D 2005

%A C. Engelmann
%A S. Scott
%A Al Geist
%T High Availability through Distributed Control
%J Proceedings High Availability and Performance Computing Workshop
%D October 2004

%A C. Engelmann
%A Al Geist
%T A Lightweight Kernel for the Harness Metacomputing Framework
%J Proceedings 14th Heterogeneous Computing Workshop
%D April 2005

%A C. Engelmann
%A Al Geist
%T Super-Scalable Algorithms for Computing on 100,000 Processors
%J Proceedings International Conference on Computational Science
%D May 2005

%A G-X. Yu
%A B-H. Park
%A P. Chandramohan
%A R. Munavalli
%A A. Geist
%A N. Samatova
%T In-silico Discovery of Enzyme-substrate Specificity Determining Residue Clusters
%J Journal of Molecular Biology
%D 2005 (In Press)

%A G-X. Yu
%A B-H. Park
%A P. Chandramohan
%A A. Geist
%A N. Samatova
%T Evolutionary-based Characterization of CO2/O2 Specificity Determining Factors for RuBisCo Protein Complex
%J Protein Engineering Design and Selection
%D 2005 (In Press)

%A B-H Park
%A P. Dam
%A Y. Yu
%A A. Geist
%A G. Heffelfinger
%A N. Samatova
%T In silico Recognition of Protein-Protein Interactions: Theory and Applications
%B Chapter in Advanced Data Minning Technologies in Bioinformatics
%D 2005 (In Press)

%A H. Lin
%A X. Ma
%A P. Chandramohan
%A A. Geist
%A N. Samatova
%T Efficient Data Access for Parallel BLAST
%J Proceedings 19th International Parallel and Distributed Processing Symposium
%D April 2005
%N (Also submitted to IEEE Transaction on Parallel and Distributed Systems)

%A S. Yoginath
%A N. Samatova
%A D. Bauer
%A G. Kora
%A G. Fann
%A A. Geist
%T RScaLAPACK: High performance Parallel Statisitcal Computing with R and ScaLAPACK
%J Proceedings 18th International Conference on Parallel and Distributed Computing Systems
%D September 2005

%A J. Cobb
%A A. Geist
%A J. Kohl
%A S. Miller
%A P. Peterson
%A G. Pike
%A M. Reuter
%A T. Swain
%A S. Vazhkudai
%A N. Vijayakumar
%T The Neutron Science TeraGrid Gateway
%J Journal of Concurrency and Computation: Theory and Practice
%D 2005

%A Al Geist
%T New Directions in PVM/Harness Research
%B Recent Advances in Parallel Virtual Machine and Message Passing Interface
%E Martino and Dongarra
%I Springer LNCS 
%D September 2005

%A M.L.Chen 
%A Al Geist 
%A David Bernholdt 
%A Kasidit Chanchio 
%A Dan Million 
%T The Design and Prototype of RUDA, A Distributed Grid Accounting System. 
%J International Journal of Critical Infrastructures
%D 2005
%N (Also in proceedings 2nd International Workshop on Grid Computing May 2005)

%A Al Geist
%T What are the System Software Challenges for SciDAC?
%D February 2005
%N Whitepaper prepared for SciDAC director

%A David Womble
%A Al Geist
%T SciDAC Computer Science Institute
%D September 2005
%N Whitepaper prepared for SciDAC director - appendix in "Scientific Discovery through Advanced Computing: Progress and Opportunities"