BLPT ANALYSIS USING LAV METHOD

See Table 1 and Table 2 in the paper

  

BLPT ANALYSIS USING LAV METHOD-- see ORNL-6818 Report  for   AC153 
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 Treatment Grp       Well Counts (see Table 1)          Residuals* 
                                         FIT  Smad(%)                   
day5 controls   965  1173   828   862  1314.9    44.3 -31  -11  -46 -42
day5 controls  1474  7237  1021   976  1314.9    44.3  11  171  -25 -30
day5 controls  1500  1729  1672  1992  1314.9    44.3  13   27   24  42
     day5 be1  1050   706  1434   687   861.0    36.3  20  -20   51 -23
    day5 be10  1551  1466  1661  2301  1605.1    10.7  -3   -9    3  36
   day5 be100  3571  5780  4011  5229  4579.7    31.3 -25   23  -13  13
day7 controls  9202  5253  3786  5212  3427.0    56.3  99   43   10  42
day7 controls  2310  2844  1915  3102  3427.0    56.3 -39  -19  -58 -10
day7 controls  2458  3936  3087  6588  3427.0    56.3 -33   14  -10  65
     day7 be1   714  1135  6084  1097  1115.8    39.7 -45    2  170  -2
    day7 be10   786   846  2757   652   815.4    22.3  -4    4  122 -22
   day7 be100  6037  8349  6852 10449  7563.6    27.8 -23   10  -10  32
          pha 82425 52954 52669 50487 52811.3     4.1  45    0    0  -5
      candida 35501 21623 21551 22087 21853.8     2.1  49   -1   -1   1

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FIT =  Fitted Value = exp(median) for each treatment group
* Residuals and Smad are on Log Percent units (L%)

Stimulation Indices
	     Day 5		   Day 7	Positve Controls
           be1  be10 be100    be1   be10 be100     pha candida 
log(SI) -0.423 0.199 1.248 -1.122 -1.436 0.792   4.792   3.909
     SI  0.655 1.221 3.483  0.326  0.238 2.207 120.490  49.860

Summary Statistics for AC153 
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Phitilde (Coef. of Variation)*
------------------------------
Overall:	 0.367 
Day 5 Control:	 0.443 	Day 5 Treated:	 0.34 	Day 5 Pooled:	 0.384 
Day 7 Control:	 0.563 	Day 7 Treated:	 0.276 	Day 7 Pooled:	 0.365 
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N:		 56 
Nprime:		 53.06 
N > z(.995):	 4 
N > z(.9995):	 3 
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* Phitilde is MAD est. of the std. dev. on log scale 
     (corresponds to CV on orig. scale)

Results Of Outlier Rejection Method for Data In Table 1

See Table 2 in The Paper

==================================================== METHOD 1 - OUTLIER REJECTION METHOD AC153 ==================================================== Reps Time Avg CV log(SI) SI day5 controls 10 4 1220.000 0.281 NA NA day5 be1 3 4 814.333 0.251 -0.404 0.667 day5 be10 4 4 1744.750 0.217 0.358 1.430 day5 be100 4 4 4647.750 0.222 1.338 3.810 day7 controls 8 4 2929.750 0.239 NA NA day7 be1 3 4 982.000 0.237 -1.093 0.335 day7 be10 3 4 761.333 0.130 -1.348 0.260 day7 be100 4 4 7921.750 0.245 0.995 2.704 ------------------------------------------------------------------